Volcano plot plotting function with ggplot2
Source:R/util_volcano_function.R
dot-volcanoFunction.RdVolcano plot plotting function with ggplot2
Usage
.volcanoFunction(
volcano,
delabSize,
maxOverlap,
title,
logFCcutoff,
PvalCutoff,
DnCol,
notDEcol,
UpCol
)Arguments
- volcano
a data.frame
- delabSize
from input$delabSize
- maxOverlap
from input$maxOverlap
- title
Contrasts title
- logFCcutoff
from input$logFCcutoff
- PvalCutoff
from input$PvalCutoff
- DnCol
from input$DnCol. Determines the colour of downregulated genes.
- notDEcol
from input$notDEcol.
- UpCol
from input$UpCol. Determines the colour of upregulated genes.
Value
A ggplot2::geom_point() object